STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P5D3M3RNA polymerase sigma factor. (534 aa)    
Predicted Functional Partners:
A0A2P5AWI6
GLE1-like.
    
  0.492
A0A2P5B837
Ribosomal protein.
   
   0.482
A0A2P5DU60
Protein HIRA; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family.
    
 0.456
A0A2P5E558
WD repeat containing protein.
    
  0.433
A0A2P5DK94
Histone chaperone, ASF1-like.
    
 0.432
A0A2P5DVZ6
Histone chaperone, ASF1-like.
    
 0.432
A0A2P5DDD1
Ribosomal protein; Belongs to the universal ribosomal protein uS17 family.
   
   0.428
A0A2P5DTJ2
Ribosomal protein.
  
   0.422
A0A2P5BVZ6
SecY/SEC61-alpha family.
  
   0.420
A0A2P5DTK8
Ribosomal protein; Belongs to the universal ribosomal protein uS13 family.
  
   0.419
Your Current Organism:
Parasponia andersonii
NCBI taxonomy Id: 3476
Other names: P. andersonii, Parasponia andersonii Planch.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.