STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P5D7L6F-box domain containing protein. (510 aa)    
Predicted Functional Partners:
A0A2P5CJJ6
CCR4-NOT transcription complex subunit.
   
 0.852
A0A2P5A9Q0
CCR4-NOT complex.
    
 0.847
A0A2P5CWI6
NOT2/NOT3/NOT.
   
 0.844
A0A2P5B2Q4
DEAD-box ATP-dependent RNA helicase; Belongs to the DEAD box helicase family.
   
 0.773
A0A2P5CVL7
Thioredoxin.
   
 0.740
A0A2P5AXE0
Clathrin, heavy chain.
   
 0.691
A0A2P5B182
Rcd1/Caf.
   
 0.691
A0A2P5D4K0
Rcd1/Caf.
   
 0.691
A0A2P5A5V4
43kDa postsynaptic protein.
    
 0.669
A0A2P5CEA9
43kDa postsynaptic protein.
    
 0.669
Your Current Organism:
Parasponia andersonii
NCBI taxonomy Id: 3476
Other names: P. andersonii, Parasponia andersonii Planch.
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.