STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P5D8H1RNA polymerase II subunit B1 CTD phosphatase RPAP2-like protein. (705 aa)    
Predicted Functional Partners:
A0A2P5CCD8
RNA polymerase II, Rpb.
    
 0.988
A0A2P5AW75
DNA-directed RNA polymerase, alpha subunit.
    
 0.987
A0A2P5CHS2
DNA-directed RNA polymerase Rpb11, 13-16kDa subunit, conserved site.
    
 0.987
A0A2P5CLL0
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
   
 0.983
A0A2P5DG58
DNA-directed RNA polymerase, subunit RPB.
    
 0.983
A0A2P5C9D4
RNA polymerase II, Rpb.
    
 0.977
A0A2P5CBI4
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.977
A0A2P5DMN2
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.977
A0A2P5AU89
DNA-directed RNA polymerase, alpha subunit.
    
 0.970
A0A2P5AHN1
DNA-directed RNA polymerase, subunit N/Rpb.
    
 0.951
Your Current Organism:
Parasponia andersonii
NCBI taxonomy Id: 3476
Other names: P. andersonii, Parasponia andersonii Planch.
Server load: low (24%) [HD]