STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P5DI73CWC16 protein. (51 aa)    
Predicted Functional Partners:
A0A2P5C9F2
Pre-mRNA splicing factor.
   
 0.949
A0A2P5D8Y6
Armadillo-type fold containing protein.
    
 0.934
A0A2P5C3B9
mRNA splicing factor SYF.
    
 0.930
A0A2P5DIC3
mRNA splicing factor Cwf21 domain containing protein.
   
 0.878
PanMYB78
MYB transcription factor.
    
 
 0.846
A0A2P5DCF8
Signal transduction response regulator.
    
 
 0.846
A0A2P5CL53
Putative pre-mRNA-splicing factor ATP-dependent RNA helicase.
    
 0.838
A0A2P5BFJ0
Isy1-like splicing.
    
 
 0.835
A0A2P5CMF9
SKI-interacting protein, SKIP.
    
 
 0.824
A0A2P5C3Z6
WD repeat containing protein.
    
 0.802
Your Current Organism:
Parasponia andersonii
NCBI taxonomy Id: 3476
Other names: P. andersonii, Parasponia andersonii Planch.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.