STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2P5DUC0Uncharacterized protein. (126 aa)    
Predicted Functional Partners:
A0A2P5CGJ4
BRCT domain containing protein.
   
 0.948
A0A2P5CKY1
Zinc finger-domain containing protein.
   
 0.948
A0A2P5DAW7
Cdk-activating kinase assembly factor.
    
 0.948
A0A2P5DGZ5
DNA mismatch repair protein.
   
 0.938
A0A2P5AFI3
General transcription factor IIH subunit.
    
 0.927
A0A2P5BEM6
NIM1-interacting TFIIH subunit.
    
 0.925
A0A2P5AJQ6
RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.
    
 0.923
A0A2P5BDX1
TFIIH subunit.
    
 0.923
A0A2P5BJR2
Serine/threonine protein kinase; Belongs to the protein kinase superfamily.
    
 0.918
A0A2P5AJ65
Cyclin.
    
 0.916
Your Current Organism:
Parasponia andersonii
NCBI taxonomy Id: 3476
Other names: P. andersonii, Parasponia andersonii Planch.
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.