STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN97093.1Xylose operon regulator. (378 aa)    
Predicted Functional Partners:
pts18CBA
N-acetylglucosamine and glucose PTS, EIICBA.
  
 0.999
KRN95750.1
PTS system, mannose-specific IIAB component.
    
 0.780
KRN96672.1
Glucokinase.
 
  
  0.738
galM3
Aldose 1-epimerase.
 
  
 0.673
KRN95344.1
Transcriptional regulator.
 
 
 0.657
nagA
N-acetylglucosamine-6-phosphate deacetylase.
 
 
 0.619
adh2
Alcohol dehydrogenase.
 
 
 0.589
KRN96159.1
Hypothetical protein.
  
 
 0.586
zwf
Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.
  
 
 0.574
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.573
Your Current Organism:
Lactobacillus siliginis
NCBI taxonomy Id: 348151
Other names: DSM 22696, JCM 16155, KCTC 3985, L. siliginis, Lactobacillus siliginis Aslam et al. 2006, NBRC 101315, strain M1-212
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.