STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN97112.1Multidrug ABC superfamily ATP binding cassette transporter, permease protein. (379 aa)    
Predicted Functional Partners:
KRN97113.1
Nodulation ATP-binding protein I family protein.
 
 0.990
KRN97111.1
Transcriptional regulator, TetR family.
     0.965
KRN97324.1
TetR family transcriptional regulator.
     0.861
KRN96473.1
ABC superfamily ATP binding cassette transporter, ABC protein.
 
 0.791
KRN96474.1
ABC transporter, permease protein.
  
    0.613
KRN94507.1
ABC-type multidrug transport system, ATPase component.
 
  0.581
KRN96418.1
ABC-type multidrug transport system, ATPase component.
 
 
 0.563
pnbA
Hypothetical protein.
  
    0.531
KRN94385.1
Mutacin ABC transporter, ATP-binding protein MutF.
 
  0.490
KRN95388.1
Hypothetical protein.
  
 
  0.418
Your Current Organism:
Lactobacillus siliginis
NCBI taxonomy Id: 348151
Other names: DSM 22696, JCM 16155, KCTC 3985, L. siliginis, Lactobacillus siliginis Aslam et al. 2006, NBRC 101315, strain M1-212
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