STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN97157.1Alpha beta hydrolase. (286 aa)    
Predicted Functional Partners:
KRN96407.1
Hypothetical protein.
  
     0.768
KRN97008.1
Hypothetical protein.
  
     0.661
KRN97149.1
Hypothetical protein.
  
     0.646
KRN95671.1
Hypothetical protein.
  
     0.603
KRN94508.1
ABC transporter permease.
  
     0.592
KRN97158.1
Hypothetical protein.
 
     0.574
KRN97306.1
Hypothetical protein.
  
     0.515
KRN93873.1
Hypothetical protein.
  
     0.505
KRN96942.1
Hypothetical protein.
  
     0.502
KRN95493.1
Hypothetical protein.
  
     0.496
Your Current Organism:
Lactobacillus siliginis
NCBI taxonomy Id: 348151
Other names: DSM 22696, JCM 16155, KCTC 3985, L. siliginis, Lactobacillus siliginis Aslam et al. 2006, NBRC 101315, strain M1-212
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.