STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN95308.1Hypothetical protein. (243 aa)    
Predicted Functional Partners:
KRN95305.1
Hypothetical protein.
 
     0.789
KRN96393.1
Hypothetical protein.
  
     0.725
KRN95058.1
Hypothetical protein.
  
     0.712
KRN96566.1
Hypothetical protein.
  
     0.712
KRN97149.1
Hypothetical protein.
  
     0.700
KRN96452.1
Transcription regulator.
  
     0.697
KRN95059.1
Hypothetical protein.
  
     0.693
KRN97144.1
Hypothetical protein.
  
     0.685
KRN97064.1
Hypothetical protein.
  
     0.609
KRN97101.1
Membrane protein.
  
     0.597
Your Current Organism:
Lactobacillus siliginis
NCBI taxonomy Id: 348151
Other names: DSM 22696, JCM 16155, KCTC 3985, L. siliginis, Lactobacillus siliginis Aslam et al. 2006, NBRC 101315, strain M1-212
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.