Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KRN93980.1 | KRN96899.1 | IV55_GL000637 | IV55_GL000771 | EDD domain protein, DegV family. | Hypothetical protein. | 0.439 |
KRN93980.1 | KRN96900.1 | IV55_GL000637 | IV55_GL000772 | EDD domain protein, DegV family. | Hypothetical protein. | 0.991 |
KRN96397.1 | KRN96899.1 | IV55_GL001363 | IV55_GL000771 | Hypothetical protein. | Hypothetical protein. | 0.585 |
KRN96397.1 | KRN96900.1 | IV55_GL001363 | IV55_GL000772 | Hypothetical protein. | Hypothetical protein. | 0.983 |
KRN96463.1 | KRN96899.1 | IV55_GL001435 | IV55_GL000771 | Hypothetical protein. | Hypothetical protein. | 0.543 |
KRN96463.1 | KRN96900.1 | IV55_GL001435 | IV55_GL000772 | Hypothetical protein. | Hypothetical protein. | 0.992 |
KRN96874.1 | KRN96900.1 | IV55_GL000745 | IV55_GL000772 | Alkaline shock protein. | Hypothetical protein. | 0.521 |
KRN96899.1 | KRN93980.1 | IV55_GL000771 | IV55_GL000637 | Hypothetical protein. | EDD domain protein, DegV family. | 0.439 |
KRN96899.1 | KRN96397.1 | IV55_GL000771 | IV55_GL001363 | Hypothetical protein. | Hypothetical protein. | 0.585 |
KRN96899.1 | KRN96463.1 | IV55_GL000771 | IV55_GL001435 | Hypothetical protein. | Hypothetical protein. | 0.543 |
KRN96899.1 | KRN96900.1 | IV55_GL000771 | IV55_GL000772 | Hypothetical protein. | Hypothetical protein. | 0.978 |
KRN96899.1 | KRN96973.1 | IV55_GL000771 | IV55_GL000848 | Hypothetical protein. | Hypothetical protein. | 0.598 |
KRN96899.1 | KRN97010.1 | IV55_GL000771 | IV55_GL000886 | Hypothetical protein. | Hypothetical protein. | 0.589 |
KRN96899.1 | plsX | IV55_GL000771 | IV55_GL000774 | Hypothetical protein. | Glycerol-3-phosphate acyltransferase PlsX; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA. | 0.560 |
KRN96899.1 | recG | IV55_GL000771 | IV55_GL000773 | Hypothetical protein. | ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily. | 0.559 |
KRN96899.1 | rpmB | IV55_GL000771 | IV55_GL000770 | Hypothetical protein. | Hypothetical protein; Belongs to the bacterial ribosomal protein bL28 family. | 0.615 |
KRN96900.1 | KRN93980.1 | IV55_GL000772 | IV55_GL000637 | Hypothetical protein. | EDD domain protein, DegV family. | 0.991 |
KRN96900.1 | KRN96397.1 | IV55_GL000772 | IV55_GL001363 | Hypothetical protein. | Hypothetical protein. | 0.983 |
KRN96900.1 | KRN96463.1 | IV55_GL000772 | IV55_GL001435 | Hypothetical protein. | Hypothetical protein. | 0.992 |
KRN96900.1 | KRN96874.1 | IV55_GL000772 | IV55_GL000745 | Hypothetical protein. | Alkaline shock protein. | 0.521 |
page 1 of 3