STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glnQ2ABC-type polar amino acid transport system, ATPase component. (245 aa)    
Predicted Functional Partners:
glnP1
Glutamine ABC transporter membrane protein.
 0.998
glnM
Glutamine transport system permease.
 0.998
KRN95409.1
Polar amino acid ABC transporter inner membrane subunit.
 0.992
KRN95470.1
ABC-type amino acid transport system, permease component.
 0.991
KRN97348.1
Amino acid ABC transporter, permease.
 0.989
glnH1
Glutamine ABC transporter, substrate binding protein.
 0.988
KRN97350.1
Amino acid ABC transporter periplasmic protein; Belongs to the bacterial solute-binding protein 3 family.
 
 0.856
oppC
ABC-type dipeptide oligopeptide nickel transport system, permease component.
 
    
 0.853
KRN95388.1
Hypothetical protein.
 
   
 
0.800
KRN95468.1
Glutamine ABC transporter substrate-binding protein.
 
 0.779
Your Current Organism:
Lactobacillus siliginis
NCBI taxonomy Id: 348151
Other names: DSM 22696, JCM 16155, KCTC 3985, L. siliginis, Lactobacillus siliginis Aslam et al. 2006, NBRC 101315, strain M1-212
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