STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN96226.1ATP cob(I)alamin adenosyltransferase. (157 aa)    
Predicted Functional Partners:
KRN96225.1
Adenosylcobalamin-dependent diol dehydratase gamma subunit; Belongs to the Cob(I)alamin adenosyltransferase family.
      0.979
PduD
Propanediol dehydratase medium subunit.
 
  
 0.904
KRN96217.1
Propanediol utilization ATPase.
 
    0.904
KRN96218.1
Hypothetical protein.
 
    0.904
KRN96216.1
Propanediol dehydratase small subunit.
 
   
 0.901
KRN96178.1
ATP cob(I)alamin adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family.
      0.899
KRN96224.1
Hypothetical protein.
 
   
 0.898
KRN96227.1
Aldehyde dehydrogenase EutE.
 
  
 0.898
KRN96214.1
pduC protein.
 
  
 0.887
KRN96213.1
Propanediol utilization protein PduB.
 
  
 0.859
Your Current Organism:
Lactobacillus siliginis
NCBI taxonomy Id: 348151
Other names: DSM 22696, JCM 16155, KCTC 3985, L. siliginis, Lactobacillus siliginis Aslam et al. 2006, NBRC 101315, strain M1-212
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.