STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN95471.1Hypothetical protein. (172 aa)    
Predicted Functional Partners:
KRN95472.1
Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape.
  
 
 0.983
mreB1
Rod shape-determining protein MreB.
  
  
 0.780
KRN95474.1
Hypothetical protein.
  
  
 0.619
KRN96098.1
Dithiol-disulfide isomerase.
  
     0.574
KRN97024.1
Hypothetical protein.
  
     0.572
ezrA
Septation ring formation regulator EzrA; Negative regulator of FtsZ ring formation; modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization; Belongs to the EzrA family.
  
   
 0.555
cmk
Cytidylate kinase.
   
    0.491
pkn1
Non-specific serine threonine protein kinase.
   
  
 0.479
rodA2
Cell division membrane protein; Belongs to the SEDS family.
  
  
 0.475
KRN96615.1
YibE F family protein.
  
     0.460
Your Current Organism:
Lactobacillus siliginis
NCBI taxonomy Id: 348151
Other names: DSM 22696, JCM 16155, KCTC 3985, L. siliginis, Lactobacillus siliginis Aslam et al. 2006, NBRC 101315, strain M1-212
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.