STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAB23RAB23, member RAS oncogene family. (237 aa)    
Predicted Functional Partners:
ARL3
ADP ribosylation factor like GTPase 3.
    
 0.683
PTAR1
Protein prenyltransferase alpha subunit repeat containing 1.
     
 0.679
CPLANE2
Ciliogenesis and planar polarity effector 2.
    
 0.670
CHM
CHM Rab escort protein.
   
 
 0.640
CHML
CHM like Rab escort protein.
   
 
 0.640
SMO
Smoothened, frizzled class receptor.
    
 
 0.587
RAB14
RAB14, member RAS oncogene family.
  
 
0.586
ARL2
ADP ribosylation factor like GTPase 2.
      
 0.559
IFT22
Intraflagellar transport 22.
      
 0.557
SUFU
SUFU negative regulator of hedgehog signaling.
      
 0.553
Your Current Organism:
Chinchilla lanigera
NCBI taxonomy Id: 34839
Other names: C. lanigera, Chinchilla velligera, Mus laniger, long-tailed chinchilla
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.