Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
VMA21Vacuolar ATPase assembly factor VMA21. (101 aa)    
Predicted Functional Partners:
ATP6V0C
ATPase H+ transporting V0 subunit c.
   
 
 0.968
KIAA2013
KIAA2013 ortholog.
   
   0.937
Atp6ap2
ATPase H+ transporting accessory protein 2.
   
 
 0.923
ENSCLAP00000017517
annotation not available
   
 
 0.923
ATP6V1F
ATPase H+ transporting V1 subunit F.
   
 
 0.918
Atp6v0e2
ATPase H+ transporting V0 subunit e2.
    
 
 0.898
ATP6V0E1
ATPase H+ transporting V0 subunit e1.
    
 
 0.898
ATP6V0D1
ATPase H+ transporting V0 subunit d1.
   
 
 0.897
ATP6V0D2
ATPase H+ transporting V0 subunit d2.
   
 
 0.897
ATP6V0A2
ATPase H+ transporting V0 subunit a2.
    
 
 0.886
Your Current Organism:
Chinchilla lanigera
NCBI taxonomy Id: 34839
Other names: C. lanigera, Chinchilla velligera, Mus laniger, long-tailed chinchilla
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