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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102017315Low-density lipoprotein receptor-related protein 1-like. (2095 aa)    
Predicted Functional Partners:
AGRN
Agrin.
    
 0.941
ANKRA2
Ankyrin repeat family A member 2.
    
 0.933
LRPAP1
LDL receptor related protein associated protein 1.
    
 0.914
APOE
Apolipoprotein E.
    
 0.911
LDLRAP1
Low density lipoprotein receptor adaptor protein 1.
    
 0.882
Shh
Sonic hedgehog signaling molecule.
     
 0.858
DKK1
Dickkopf WNT signaling pathway inhibitor 1.
    
 0.856
RELN
Reelin.
    
 0.811
IHH
Indian hedgehog signaling molecule.
     
 0.806
LOC102028604
Disabled homolog 2-like.
    
 0.804
Your Current Organism:
Chinchilla lanigera
NCBI taxonomy Id: 34839
Other names: C. lanigera, Chinchilla velligera, Mus laniger, long-tailed chinchilla
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.