Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SECISBP2SECIS binding protein 2. (878 aa)    
Predicted Functional Partners:
EEFSEC
Eukaryotic elongation factor, selenocysteine-tRNA specific.
   
 0.986
HSPA5
Heat shock protein family A (Hsp70) member 5.
  
 0.913
Ankrd45
Ankyrin repeat domain 45.
  
 0.913
SUOX
Sulfite oxidase.
   
 0.884
RPL35
Ribosomal protein L35.
    
  0.843
Sars2
seryl-tRNA synthetase 2, mitochondrial.
     
 0.843
SARS1
seryl-tRNA synthetase 1.
     
 0.841
ERO1A
Endoplasmic reticulum oxidoreductase 1 alpha.
   
 0.782
ERO1B
Endoplasmic reticulum oxidoreductase 1 beta.
   
 0.782
DNAJC10
DnaJ heat shock protein family (Hsp40) member C10.
  
 0.775
Your Current Organism:
Chinchilla lanigera
NCBI taxonomy Id: 34839
Other names: C. lanigera, Chinchilla velligera, Mus laniger, long-tailed chinchilla
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