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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XRN15'-3' exoribonuclease 1. (1726 aa)    
Predicted Functional Partners:
DCP2
Decapping mRNA 2.
   
 0.998
DCP1A
Decapping mRNA 1A.
    
 0.997
XRN2
5'-3' exoribonuclease 2.
  
 
0.991
ENSCLAP00000013957
annotation not available
    
 0.989
LSM1
LSM1 homolog, mRNA degradation associated.
    
 0.980
PATL1
PAT1 homolog 1, processing body mRNA decay factor.
    
 0.976
PATL2
PAT1 homolog 2.
    
 0.971
LSM3
LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated.
    
 0.970
C19orf54
Chromosome unknown open reading frame, human C19orf54.
    
 0.964
RACK1
Receptor for activated C kinase 1.
    
 
 0.957
Your Current Organism:
Chinchilla lanigera
NCBI taxonomy Id: 34839
Other names: C. lanigera, Chinchilla velligera, Mus laniger, long-tailed chinchilla
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.