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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102020855Neutrophil gelatinase-associated lipocalin-like. (197 aa)    
Predicted Functional Partners:
HAMP
Hepcidin antimicrobial peptide.
   
 
 0.709
CDC73
Cell division cycle 73.
    
 0.689
CTLA4
Cytotoxic T-lymphocyte associated protein 4.
    
 
 0.685
Paf1
PAF1 homolog, Paf1/RNA polymerase II complex component.
    
  0.670
SLC22A17
Solute carrier family 22 member 17.
    
 0.661
SLC3A2
Solute carrier family 3 member 2.
    
   0.654
FN1
Fibronectin 1.
    
   0.654
CINP
Cyclin dependent kinase 2 interacting protein.
    
 0.648
CTR9
CTR9 homolog, Paf1/RNA polymerase II complex component.
    
 0.648
CD28
CD28 molecule.
    
 
 0.644
Your Current Organism:
Chinchilla lanigera
NCBI taxonomy Id: 34839
Other names: C. lanigera, Chinchilla velligera, Mus laniger, long-tailed chinchilla
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.