Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CUEDC2CUE domain containing 2. (285 aa)    
Predicted Functional Partners:
TBP
TATA-box binding protein.
   
   0.985
FZR1
Fizzy and cell division cycle 20 related 1.
    
   0.894
TBPL2
TATA-box binding protein like 2.
   
   0.859
GTF2A1
General transcription factor IIA subunit 1.
    
   0.823
CDC27
Cell division cycle 27.
    
 
 0.818
ESR1
Estrogen receptor 1.
    
 
 0.797
MYNN
Myoneurin.
      
 0.771
RNF26
Ring finger protein 26.
    
   0.720
PREPL
Prolyl endopeptidase like.
      
 0.639
CUEDC1
CUE domain containing 1.
      
 0.633
Your Current Organism:
Chinchilla lanigera
NCBI taxonomy Id: 34839
Other names: C. lanigera, Chinchilla velligera, Mus laniger, long-tailed chinchilla
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