STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RIMS3Regulating synaptic membrane exocytosis 3. (308 aa)    
Predicted Functional Partners:
CASK
Calcium/calmodulin dependent serine protein kinase.
   
 0.980
UNC13B
Protein unc-13 homolog B.
    
 0.862
Unc13a
Unc-13 homolog A.
    
 0.862
UNC13C
Unc-13 homolog C.
    
 0.862
RAPGEF4
Rap guanine nucleotide exchange factor 4.
    
 0.830
RIMBP2
RIMS binding protein 2.
    
 0.791
TSPOAP1
TSPO associated protein 1.
    
 0.791
LOC102017609
RIMS-binding protein 3A-like.
    
 0.791
PPFIA3
PTPRF interacting protein alpha 3.
   
 0.743
SNAP25
Synaptosome associated protein 25.
   
 
 0.730
Your Current Organism:
Chinchilla lanigera
NCBI taxonomy Id: 34839
Other names: C. lanigera, Chinchilla velligera, Mus laniger, long-tailed chinchilla
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.