Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RNPC3 | SNRNP35 | ENSCLAP00000007349 | ENSCLAP00000014840 | RNA binding region (RNP1, RRM) containing 3. | Small nuclear ribonucleoprotein U11/U12 subunit 35. | 0.924 |
RNPC3 | SNRNP48 | ENSCLAP00000007349 | ENSCLAP00000005305 | RNA binding region (RNP1, RRM) containing 3. | Small nuclear ribonucleoprotein U11/U12 subunit 48. | 0.814 |
RNPC3 | SNRNP70 | ENSCLAP00000007349 | ENSCLAP00000011594 | RNA binding region (RNP1, RRM) containing 3. | Small nuclear ribonucleoprotein U1 subunit 70. | 0.853 |
RNPC3 | SRSF5 | ENSCLAP00000007349 | ENSCLAP00000006747 | RNA binding region (RNP1, RRM) containing 3. | Serine and arginine rich splicing factor 5. | 0.616 |
RNPC3 | SRSF9 | ENSCLAP00000007349 | ENSCLAP00000017911 | RNA binding region (RNP1, RRM) containing 3. | Serine and arginine rich splicing factor 9. | 0.619 |
RNPC3 | Srsf1 | ENSCLAP00000007349 | ENSCLAP00000021472 | RNA binding region (RNP1, RRM) containing 3. | Serine and arginine rich splicing factor 1. | 0.619 |
RNPC3 | U2AF2 | ENSCLAP00000007349 | ENSCLAP00000000757 | RNA binding region (RNP1, RRM) containing 3. | U2 small nuclear RNA auxiliary factor 2. | 0.640 |
RNPC3 | ZRSR2 | ENSCLAP00000007349 | ENSCLAP00000002902 | RNA binding region (RNP1, RRM) containing 3. | Zinc finger CCCH-type, RNA binding motif and serine/arginine rich 2. | 0.806 |
SNRNP35 | RNPC3 | ENSCLAP00000014840 | ENSCLAP00000007349 | Small nuclear ribonucleoprotein U11/U12 subunit 35. | RNA binding region (RNP1, RRM) containing 3. | 0.924 |
SNRNP35 | SNRNP48 | ENSCLAP00000014840 | ENSCLAP00000005305 | Small nuclear ribonucleoprotein U11/U12 subunit 35. | Small nuclear ribonucleoprotein U11/U12 subunit 48. | 0.975 |
SNRNP35 | SRSF2 | ENSCLAP00000014840 | ENSCLAP00000018151 | Small nuclear ribonucleoprotein U11/U12 subunit 35. | Serine and arginine rich splicing factor 2. | 0.897 |
SNRNP35 | SRSF5 | ENSCLAP00000014840 | ENSCLAP00000006747 | Small nuclear ribonucleoprotein U11/U12 subunit 35. | Serine and arginine rich splicing factor 5. | 0.670 |
SNRNP35 | SRSF7 | ENSCLAP00000014840 | ENSCLAP00000007451 | Small nuclear ribonucleoprotein U11/U12 subunit 35. | Serine and arginine rich splicing factor 7. | 0.824 |
SNRNP35 | SRSF9 | ENSCLAP00000014840 | ENSCLAP00000017911 | Small nuclear ribonucleoprotein U11/U12 subunit 35. | Serine and arginine rich splicing factor 9. | 0.794 |
SNRNP35 | Srsf1 | ENSCLAP00000014840 | ENSCLAP00000021472 | Small nuclear ribonucleoprotein U11/U12 subunit 35. | Serine and arginine rich splicing factor 1. | 0.848 |
SNRNP35 | U2AF2 | ENSCLAP00000014840 | ENSCLAP00000000757 | Small nuclear ribonucleoprotein U11/U12 subunit 35. | U2 small nuclear RNA auxiliary factor 2. | 0.969 |
SNRNP35 | ZRSR2 | ENSCLAP00000014840 | ENSCLAP00000002902 | Small nuclear ribonucleoprotein U11/U12 subunit 35. | Zinc finger CCCH-type, RNA binding motif and serine/arginine rich 2. | 0.862 |
SNRNP48 | RNPC3 | ENSCLAP00000005305 | ENSCLAP00000007349 | Small nuclear ribonucleoprotein U11/U12 subunit 48. | RNA binding region (RNP1, RRM) containing 3. | 0.814 |
SNRNP48 | SNRNP35 | ENSCLAP00000005305 | ENSCLAP00000014840 | Small nuclear ribonucleoprotein U11/U12 subunit 48. | Small nuclear ribonucleoprotein U11/U12 subunit 35. | 0.975 |
SNRNP48 | SNRNP70 | ENSCLAP00000005305 | ENSCLAP00000011594 | Small nuclear ribonucleoprotein U11/U12 subunit 48. | Small nuclear ribonucleoprotein U1 subunit 70. | 0.897 |
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