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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TTC27Tetratricopeptide repeat domain 27. (847 aa)    
Predicted Functional Partners:
Pwp2
PWP2 small subunit processome component.
   
    0.931
WDR36
WD repeat domain 36.
   
    0.897
WDR3
WD repeat domain 3.
   
  
 0.897
NAT10
N-acetyltransferase 10.
   
    0.885
TBL3
Transducin beta like 3.
   
  
 0.879
HEATR1
HEAT repeat containing 1.
   
    0.866
POLR1B
RNA polymerase I subunit B.
   
    0.865
POLR3B
RNA polymerase III subunit B.
   
    0.864
EFL1
Elongation factor like GTPase 1.
   
 
 0.856
RRP12
Ribosomal RNA processing 12 homolog.
   
    0.851
Your Current Organism:
Chinchilla lanigera
NCBI taxonomy Id: 34839
Other names: C. lanigera, Chinchilla velligera, Mus laniger, long-tailed chinchilla
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.