STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NONOnon-POU domain containing octamer binding. (474 aa)    
Predicted Functional Partners:
SRSF4
Serine and arginine rich splicing factor 4.
   
 
 0.623
SRSF11
Serine and arginine rich splicing factor 11.
   
 
 0.619
CSTF2
Cleavage stimulation factor subunit 2.
   
 
 0.615
PTK6
Protein tyrosine kinase 6.
    
  0.589
PTBP1
Polypyrimidine tract binding protein 1.
   
 
0.582
LOC102021537
Heterogeneous nuclear ribonucleoprotein M-like.
   
 
 0.581
Hnrnpm
Heterogeneous nuclear ribonucleoprotein M.
   
 
 0.581
CDC40
Cell division cycle 40.
      
 0.544
PTBP2
Polypyrimidine tract binding protein 2.
   
 
 0.525
FUS
RNA-binding protein FUS.
   
 
 0.523
Your Current Organism:
Chinchilla lanigera
NCBI taxonomy Id: 34839
Other names: C. lanigera, Chinchilla velligera, Mus laniger, long-tailed chinchilla
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.