STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCHY1Ring finger and CHY zinc finger domain containing 1. (231 aa)    
Predicted Functional Partners:
TP53
Tumor protein p53.
    
 0.994
POLH
DNA polymerase eta.
    
 0.989
TP73
Tumor protein p73.
    
 0.902
TP63
Tumor protein p63.
    
 0.902
POLI
DNA polymerase iota.
    
 0.827
AR
Androgen receptor.
    
 
 0.767
ENSCLAP00000005260
annotation not available
    
 0.758
RPS27A
Ribosomal protein S27a.
    
 0.758
ENSCLAP00000021912
annotation not available
    
 0.758
TBX1
T-box transcription factor 1.
   
    0.746
Your Current Organism:
Chinchilla lanigera
NCBI taxonomy Id: 34839
Other names: C. lanigera, Chinchilla velligera, Mus laniger, long-tailed chinchilla
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.