Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
FGF16 | VSX2 | ENSCLAP00000000073 | ENSCLAP00000009571 | Fibroblast growth factor 16. | Visual system homeobox 2. | 0.614 |
FOXN4 | VSX2 | ENSCLAP00000024087 | ENSCLAP00000009571 | Forkhead box N4. | Visual system homeobox 2. | 0.543 |
GAP43 | VSX2 | ENSCLAP00000024154 | ENSCLAP00000009571 | Growth associated protein 43. | Visual system homeobox 2. | 0.457 |
NXNL1 | VSX2 | ENSCLAP00000010342 | ENSCLAP00000009571 | Nucleoredoxin like 1. | Visual system homeobox 2. | 0.447 |
POU4F2 | VSX2 | ENSCLAP00000005913 | ENSCLAP00000009571 | POU class 4 homeobox 2. | Visual system homeobox 2. | 0.445 |
RCVRN | RHO | ENSCLAP00000022630 | ENSCLAP00000008928 | Recoverin. | Rhodopsin. | 0.923 |
RCVRN | VSX2 | ENSCLAP00000022630 | ENSCLAP00000009571 | Recoverin. | Visual system homeobox 2. | 0.455 |
RHO | RCVRN | ENSCLAP00000008928 | ENSCLAP00000022630 | Rhodopsin. | Recoverin. | 0.923 |
RHO | VSX2 | ENSCLAP00000008928 | ENSCLAP00000009571 | Rhodopsin. | Visual system homeobox 2. | 0.467 |
SIX3 | SIX6 | ENSCLAP00000023952 | ENSCLAP00000005232 | SIX homeobox 3. | SIX homeobox 6. | 0.415 |
SIX3 | VSX2 | ENSCLAP00000023952 | ENSCLAP00000009571 | SIX homeobox 3. | Visual system homeobox 2. | 0.485 |
SIX6 | SIX3 | ENSCLAP00000005232 | ENSCLAP00000023952 | SIX homeobox 6. | SIX homeobox 3. | 0.415 |
SIX6 | VSX2 | ENSCLAP00000005232 | ENSCLAP00000009571 | SIX homeobox 6. | Visual system homeobox 2. | 0.521 |
USP12 | VSX2 | ENSCLAP00000004993 | ENSCLAP00000009571 | Ubiquitin specific peptidase 12. | Visual system homeobox 2. | 0.443 |
VSX2 | FGF16 | ENSCLAP00000009571 | ENSCLAP00000000073 | Visual system homeobox 2. | Fibroblast growth factor 16. | 0.614 |
VSX2 | FOXN4 | ENSCLAP00000009571 | ENSCLAP00000024087 | Visual system homeobox 2. | Forkhead box N4. | 0.543 |
VSX2 | GAP43 | ENSCLAP00000009571 | ENSCLAP00000024154 | Visual system homeobox 2. | Growth associated protein 43. | 0.457 |
VSX2 | NXNL1 | ENSCLAP00000009571 | ENSCLAP00000010342 | Visual system homeobox 2. | Nucleoredoxin like 1. | 0.447 |
VSX2 | POU4F2 | ENSCLAP00000009571 | ENSCLAP00000005913 | Visual system homeobox 2. | POU class 4 homeobox 2. | 0.445 |
VSX2 | RCVRN | ENSCLAP00000009571 | ENSCLAP00000022630 | Visual system homeobox 2. | Recoverin. | 0.455 |
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