STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPFIA2PTPRF interacting protein alpha 2. (1257 aa)    
Predicted Functional Partners:
RIMS2
Regulating synaptic membrane exocytosis 2.
   
 0.992
CASK
Calcium/calmodulin dependent serine protein kinase.
    
 0.972
PPP2CB
Protein phosphatase 2 catalytic subunit beta.
    
   0.860
PPP2CA
Protein phosphatase 2 catalytic subunit alpha.
    
   0.860
PPFIBP1
PPFIA binding protein 1.
   
0.828
PPFIBP2
PPFIA binding protein 2.
   
0.828
GIT1
GIT ArfGAP 1.
    
 
 0.794
MPP1
Membrane palmitoylated protein 1.
    
 0.778
ENSCLAP00000000883
annotation not available
    
 
 0.762
Ppp2r1a
Protein phosphatase 2 scaffold subunit Aalpha.
    
 
 0.762
Your Current Organism:
Chinchilla lanigera
NCBI taxonomy Id: 34839
Other names: C. lanigera, Chinchilla velligera, Mus laniger, long-tailed chinchilla
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.