STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DNAJC6DnaJ heat shock protein family (Hsp40) member C6. (954 aa)    
Predicted Functional Partners:
CLHC1
Clathrin heavy chain linker domain containing 1.
   
 0.998
CLTC
Clathrin heavy chain.
   
 0.998
CLTCL1
Clathrin heavy chain like 1.
   
 0.998
GAK
Cyclin G associated kinase.
   
0.992
IGF2R
Insulin like growth factor 2 receptor.
   
 0.980
SORL1
Sortilin related receptor 1.
   
 0.980
YIPF6
Yip1 domain family member 6.
     
 0.976
SNAPIN
SNAP associated protein.
   
 
  0.975
CLTA
Clathrin light chain A.
    
 0.971
CLTB
Clathrin light chain B.
    
 0.971
Your Current Organism:
Chinchilla lanigera
NCBI taxonomy Id: 34839
Other names: C. lanigera, Chinchilla velligera, Mus laniger, long-tailed chinchilla
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.