STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102009461Immunoglobulin omega chain-like. (142 aa)    
Predicted Functional Partners:
LRIT1
Leucine rich repeat, Ig-like and transmembrane domains 1.
    
  0.623
LRIT3
Leucine rich repeat, Ig-like and transmembrane domains 3.
    
  0.623
GNAL
G protein subunit alpha L.
    
  0.613
HABP2
Hyaluronan binding protein 2.
    
  0.590
HGFAC
HGF activator.
    
  0.590
F12
Coagulation factor XII.
    
  0.590
CD274
CD274 molecule.
   
  0.564
LOC102021829
HLA class I histocompatibility antigen, B-18 alpha chain-like.
    
  0.526
MR1
Major histocompatibility complex class I-related gene protein.
    
  0.526
LGR4
Leucine rich repeat containing G protein-coupled receptor 4.
    
  0.524
Your Current Organism:
Chinchilla lanigera
NCBI taxonomy Id: 34839
Other names: C. lanigera, Chinchilla velligera, Mus laniger, long-tailed chinchilla
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.