Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGRN | HSPG2 | ENSCLAP00000015325 | ENSCLAP00000013736 | Agrin. | Heparan sulfate proteoglycan 2. | 0.674 |
AGRN | NID2 | ENSCLAP00000015325 | ENSCLAP00000014497 | Agrin. | Nidogen 2. | 0.801 |
CYB5R4 | NID2 | ENSCLAP00000017852 | ENSCLAP00000014497 | Cytochrome b5 reductase 4. | Nidogen 2. | 0.753 |
HSPG2 | AGRN | ENSCLAP00000013736 | ENSCLAP00000015325 | Heparan sulfate proteoglycan 2. | Agrin. | 0.674 |
HSPG2 | LAMA2 | ENSCLAP00000013736 | ENSCLAP00000017503 | Heparan sulfate proteoglycan 2. | Laminin subunit alpha 2. | 0.465 |
HSPG2 | LAMA4 | ENSCLAP00000013736 | ENSCLAP00000000117 | Heparan sulfate proteoglycan 2. | Laminin subunit alpha 4. | 0.462 |
HSPG2 | LAMC1 | ENSCLAP00000013736 | ENSCLAP00000020426 | Heparan sulfate proteoglycan 2. | Laminin subunit gamma 1. | 0.561 |
HSPG2 | LAMC3 | ENSCLAP00000013736 | ENSCLAP00000016287 | Heparan sulfate proteoglycan 2. | Laminin subunit gamma 3. | 0.516 |
HSPG2 | Lama3 | ENSCLAP00000013736 | ENSCLAP00000015055 | Heparan sulfate proteoglycan 2. | Laminin subunit alpha 3. | 0.484 |
HSPG2 | NID2 | ENSCLAP00000013736 | ENSCLAP00000014497 | Heparan sulfate proteoglycan 2. | Nidogen 2. | 0.965 |
LAMA2 | HSPG2 | ENSCLAP00000017503 | ENSCLAP00000013736 | Laminin subunit alpha 2. | Heparan sulfate proteoglycan 2. | 0.465 |
LAMA2 | LAMA4 | ENSCLAP00000017503 | ENSCLAP00000000117 | Laminin subunit alpha 2. | Laminin subunit alpha 4. | 0.779 |
LAMA2 | LAMB1 | ENSCLAP00000017503 | ENSCLAP00000012038 | Laminin subunit alpha 2. | Laminin subunit beta 1. | 0.956 |
LAMA2 | LAMC1 | ENSCLAP00000017503 | ENSCLAP00000020426 | Laminin subunit alpha 2. | Laminin subunit gamma 1. | 0.957 |
LAMA2 | LAMC2 | ENSCLAP00000017503 | ENSCLAP00000018053 | Laminin subunit alpha 2. | Laminin subunit gamma 2. | 0.962 |
LAMA2 | LAMC3 | ENSCLAP00000017503 | ENSCLAP00000016287 | Laminin subunit alpha 2. | Laminin subunit gamma 3. | 0.948 |
LAMA2 | Lama3 | ENSCLAP00000017503 | ENSCLAP00000015055 | Laminin subunit alpha 2. | Laminin subunit alpha 3. | 0.753 |
LAMA2 | NID2 | ENSCLAP00000017503 | ENSCLAP00000014497 | Laminin subunit alpha 2. | Nidogen 2. | 0.753 |
LAMA4 | HSPG2 | ENSCLAP00000000117 | ENSCLAP00000013736 | Laminin subunit alpha 4. | Heparan sulfate proteoglycan 2. | 0.462 |
LAMA4 | LAMA2 | ENSCLAP00000000117 | ENSCLAP00000017503 | Laminin subunit alpha 4. | Laminin subunit alpha 2. | 0.779 |
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