STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TNNI1Troponin I1, slow skeletal type. (187 aa)    
Predicted Functional Partners:
TNNC1
Troponin C1, slow skeletal and cardiac type.
   
 0.988
TNNT2
Troponin T2, cardiac type.
  
 0.977
TNNT1
Troponin T1, slow skeletal type.
  
 0.976
TNNC2
Troponin C2, fast skeletal type.
   
 0.976
MYL1
Myosin light chain 1.
   
 0.972
TNNT3
Troponin T3, fast skeletal type.
  
 0.968
SMIM20
Small integral membrane protein 20.
   
 0.938
MYL3
Myosin light chain 3.
   
 0.889
MYLPF
Myosin light chain, phosphorylatable, fast skeletal muscle.
   
 0.885
GATD1
Glutamine amidotransferase like class 1 domain containing 1.
   
 0.871
Your Current Organism:
Chinchilla lanigera
NCBI taxonomy Id: 34839
Other names: C. lanigera, Chinchilla velligera, Mus laniger, long-tailed chinchilla
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.