STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CMSS1Cms1 ribosomal small subunit homolog. (233 aa)    
Predicted Functional Partners:
NOP53
NOP53 ribosome biogenesis factor.
   
    0.885
Ltv1
LTV1 ribosome biogenesis factor.
   
    0.871
BYSL
Bystin like.
   
  
 0.849
NIFK
Nucleolar protein interacting with the FHA domain of MKI67.
   
    0.803
NOL10
Nucleolar protein 10.
   
  
 0.790
RBM28
RNA binding motif protein 28.
   
    0.775
UTP3
UTP3 small subunit processome component.
   
    0.758
KRR1
KRR1 small subunit processome component homolog.
   
   0.757
ENSCLAP00000000673
annotation not available
   
    0.754
CD3EAP
CD3e molecule associated protein.
   
  
 0.754
Your Current Organism:
Chinchilla lanigera
NCBI taxonomy Id: 34839
Other names: C. lanigera, Chinchilla velligera, Mus laniger, long-tailed chinchilla
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.