STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NIPSNAP3AProtein NipSnap homolog 3A-like. (227 aa)    
Predicted Functional Partners:
MTHFSD
Methenyltetrahydrofolate synthetase domain containing.
   
    0.743
DBT
Dihydrolipoamide branched chain transacylase E2.
   
 
  0.603
UTP15
UTP15 small subunit processome component.
   
    0.602
PSMD1
Proteasome 26S subunit, non-ATPase 1.
   
    0.599
WDR6
WD repeat domain 6.
   
    0.599
LAMTOR1
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 1.
   
  0.586
NOP56
NOP56 ribonucleoprotein.
   
    0.584
NPAS4
Neuronal PAS domain protein 4.
   
    0.584
SLC46A2
Solute carrier family 46 member 2.
   
  
 0.558
TDRD3
Tudor domain containing 3.
      
 0.554
Your Current Organism:
Chinchilla lanigera
NCBI taxonomy Id: 34839
Other names: C. lanigera, Chinchilla velligera, Mus laniger, long-tailed chinchilla
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.