STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ITGB5Integrin subunit beta 5. (822 aa)    
Predicted Functional Partners:
ITGAV
Integrin subunit alpha V.
   
 0.965
FLNA
Filamin A.
    
 0.964
FLNC
Filamin C.
    
 0.963
FLNB
Filamin B.
    
 0.963
ITGA5
Integrin subunit alpha 5.
   
 0.958
TLN1
Talin 1.
   
 0.952
ITGA1
Integrin subunit alpha 1.
   
 0.935
ITGA3
Integrin subunit alpha 3.
   
 0.935
ITGA4
Integrin subunit alpha 4.
   
 0.933
VTN
Vitronectin.
    
 0.931
Your Current Organism:
Chinchilla lanigera
NCBI taxonomy Id: 34839
Other names: C. lanigera, Chinchilla velligera, Mus laniger, long-tailed chinchilla
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.