STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPRD2Regulation of nuclear pre-mRNA domain containing 2. (1461 aa)    
Predicted Functional Partners:
POLR2B
RNA polymerase II subunit B.
   
 0.959
RPAP2
RNA polymerase II associated protein 2.
   
 0.938
POLR2G
RNA polymerase II subunit G.
    
  0.927
RPRD1B
Regulation of nuclear pre-mRNA domain containing 1B.
    
0.912
XRN2
5'-3' exoribonuclease 2.
   
 
 0.896
RPRD1A
Regulation of nuclear pre-mRNA domain containing 1A.
    
0.862
Polr2a
RNA polymerase II subunit A.
    
 0.859
POLR2C
RNA polymerase II subunit C.
    
 0.858
POLR2D
RNA polymerase II subunit D.
    
  0.844
PCF11
PCF11 cleavage and polyadenylation factor subunit.
    
 0.844
Your Current Organism:
Chinchilla lanigera
NCBI taxonomy Id: 34839
Other names: C. lanigera, Chinchilla velligera, Mus laniger, long-tailed chinchilla
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.