STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRNKL1Crooked neck pre-mRNA splicing factor 1. (687 aa)    
Predicted Functional Partners:
XAB2
XPA binding protein 2.
   
0.999
AQR
Aquarius intron-binding spliceosomal factor.
    
 0.999
Isy1
ISY1 splicing factor homolog.
   
 0.999
BUD31
BUD31 homolog.
    
 0.999
SYF2
SYF2 pre-mRNA splicing factor.
    
 0.999
SNW1
SNW domain containing 1.
  
 0.999
PPIE
Peptidylprolyl isomerase E.
   
 0.998
CDC5L
Cell division cycle 5 like.
   
 
 0.996
PLRG1
Pleiotropic regulator 1.
   
 
 0.995
CDC40
Cell division cycle 40.
   
 
 0.995
Your Current Organism:
Chinchilla lanigera
NCBI taxonomy Id: 34839
Other names: C. lanigera, Chinchilla velligera, Mus laniger, long-tailed chinchilla
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.