STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APOA4Apolipoprotein A4. (399 aa)    
Predicted Functional Partners:
APOC3
Apolipoprotein C3.
   
 
 0.961
APOA2
Apolipoprotein A2.
   
 
 0.868
APOE
Apolipoprotein E.
     
0.849
APOC2
Apolipoprotein C2.
   
 
 0.840
APOB
Apolipoprotein B.
   
 
 0.795
Apoa1
Apolipoprotein A1.
  
 
0.750
ENSCLAP00000001501
annotation not available
   
  
 0.563
CLU
Clusterin.
      
 0.555
APOD
Apolipoprotein D.
      
 0.499
RBP2
Retinol binding protein 2.
   
 
 0.484
Your Current Organism:
Chinchilla lanigera
NCBI taxonomy Id: 34839
Other names: C. lanigera, Chinchilla velligera, Mus laniger, long-tailed chinchilla
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.