STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APOLD1Apolipoprotein L domain containing 1. (273 aa)    
Predicted Functional Partners:
H6PD
splA/ryanodine receptor domain and SOCS box containing 1.
   
 
 0.804
ERCC4
ERCC excision repair 4, endonuclease catalytic subunit.
    
 0.712
CENPT
Centromere protein T.
    
 0.707
B2M
Beta-2-microglobulin.
    
 0.677
RPA2
Replication protein A2.
    
 0.677
Rpa1
Replication protein A1.
    
 0.672
ENSCLAP00000021957
annotation not available
    
 0.672
LIN52
Lin-52 DREAM MuvB core complex component.
    
 0.647
LIN9
Lin-9 DREAM MuvB core complex component.
    
 0.644
SLC25A42
Solute carrier family 25 member 42.
    
 0.631
Your Current Organism:
Chinchilla lanigera
NCBI taxonomy Id: 34839
Other names: C. lanigera, Chinchilla velligera, Mus laniger, long-tailed chinchilla
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.