Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DMC1 | MND1 | ENSCLAP00000025249 | ENSCLAP00000019834 | DNA meiotic recombinase 1. | Meiotic nuclear divisions 1. | 0.754 |
DMC1 | MSH4 | ENSCLAP00000025249 | ENSCLAP00000010679 | DNA meiotic recombinase 1. | mutS homolog 4. | 0.797 |
DMC1 | PSMC3IP | ENSCLAP00000025249 | ENSCLAP00000023126 | DNA meiotic recombinase 1. | PSMC3 interacting protein. | 0.759 |
DMC1 | RAD51 | ENSCLAP00000025249 | ENSCLAP00000017016 | DNA meiotic recombinase 1. | RAD51 recombinase. | 0.986 |
DMC1 | RAD51B | ENSCLAP00000025249 | ENSCLAP00000005338 | DNA meiotic recombinase 1. | RAD51 paralog B. | 0.953 |
DMC1 | RAD51C | ENSCLAP00000025249 | ENSCLAP00000018473 | DNA meiotic recombinase 1. | RAD51 paralog C. | 0.622 |
DMC1 | RAD51D | ENSCLAP00000025249 | ENSCLAP00000007070 | DNA meiotic recombinase 1. | RAD51 paralog D. | 0.928 |
DMC1 | SPO11 | ENSCLAP00000025249 | ENSCLAP00000012592 | DNA meiotic recombinase 1. | SPO11 initiator of meiotic double stranded breaks. | 0.901 |
HSF2BP | MCM9 | ENSCLAP00000009399 | ENSCLAP00000014023 | Heat shock transcription factor 2 binding protein. | Minichromosome maintenance 9 homologous recombination repair factor. | 0.544 |
HSF2BP | PSMC3IP | ENSCLAP00000009399 | ENSCLAP00000023126 | Heat shock transcription factor 2 binding protein. | PSMC3 interacting protein. | 0.552 |
MCM9 | HSF2BP | ENSCLAP00000014023 | ENSCLAP00000009399 | Minichromosome maintenance 9 homologous recombination repair factor. | Heat shock transcription factor 2 binding protein. | 0.544 |
MCM9 | MSH4 | ENSCLAP00000014023 | ENSCLAP00000010679 | Minichromosome maintenance 9 homologous recombination repair factor. | mutS homolog 4. | 0.626 |
MCM9 | PSMC3IP | ENSCLAP00000014023 | ENSCLAP00000023126 | Minichromosome maintenance 9 homologous recombination repair factor. | PSMC3 interacting protein. | 0.617 |
MCM9 | RAD51 | ENSCLAP00000014023 | ENSCLAP00000017016 | Minichromosome maintenance 9 homologous recombination repair factor. | RAD51 recombinase. | 0.483 |
MCM9 | RAD51B | ENSCLAP00000014023 | ENSCLAP00000005338 | Minichromosome maintenance 9 homologous recombination repair factor. | RAD51 paralog B. | 0.483 |
MCM9 | RAD51D | ENSCLAP00000014023 | ENSCLAP00000007070 | Minichromosome maintenance 9 homologous recombination repair factor. | RAD51 paralog D. | 0.483 |
MND1 | DMC1 | ENSCLAP00000019834 | ENSCLAP00000025249 | Meiotic nuclear divisions 1. | DNA meiotic recombinase 1. | 0.754 |
MND1 | MSH4 | ENSCLAP00000019834 | ENSCLAP00000010679 | Meiotic nuclear divisions 1. | mutS homolog 4. | 0.620 |
MND1 | PSMC3IP | ENSCLAP00000019834 | ENSCLAP00000023126 | Meiotic nuclear divisions 1. | PSMC3 interacting protein. | 0.998 |
MND1 | RAD51 | ENSCLAP00000019834 | ENSCLAP00000017016 | Meiotic nuclear divisions 1. | RAD51 recombinase. | 0.838 |
page 1 of 5