STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PLXNB2Plexin B2. (1844 aa)    
Predicted Functional Partners:
ARHGEF11
Rho guanine nucleotide exchange factor 11.
    
 0.983
SEMA4D
Semaphorin 4D.
    
 0.980
RHOD
Ras homolog family member D.
    
 0.969
ARHGEF12
Rho guanine nucleotide exchange factor 12.
    
 0.954
SEMA4C
Semaphorin 4C.
   
0.953
RND1
Rho family GTPase 1.
    
 0.949
SEMA4G
Semaphorin 4G.
    
0.935
SEMA4A
Semaphorin 4A.
    
0.929
SEMA4B
Semaphorin 4B.
    
0.919
SEMA4F
Ssemaphorin 4F.
    
 0.912
Your Current Organism:
Chinchilla lanigera
NCBI taxonomy Id: 34839
Other names: C. lanigera, Chinchilla velligera, Mus laniger, long-tailed chinchilla
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.