STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SVEP1Sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1. (3572 aa)    
Predicted Functional Partners:
RIPK4
Receptor interacting serine/threonine kinase 4.
   
 0.893
RNASEL
Ribonuclease L.
   
 0.852
TNC
Tenascin C.
    
0.851
TNN
Tenascin N.
    
 0.851
TNR
Tenascin R.
    
0.851
PTPN11
Protein tyrosine phosphatase non-receptor type 11.
    
 0.835
PTPN6
Protein tyrosine phosphatase non-receptor type 6.
    
 0.827
NCSTN
Nicastrin.
    
 0.793
EGFLAM
EGF like, fibronectin type III and laminin G domains.
    
 0.789
WIF1
WNT inhibitory factor 1.
    
 
0.786
Your Current Organism:
Chinchilla lanigera
NCBI taxonomy Id: 34839
Other names: C. lanigera, Chinchilla velligera, Mus laniger, long-tailed chinchilla
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.