STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102011379Histone H2B type 1-B-like. (126 aa)    
Predicted Functional Partners:
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.872
GLYR1
Glyoxylate reductase 1 homolog.
    
   0.858
KDM6A
Lysine demethylase 6A.
    
 0.857
KDM6B
Lysine demethylase 6B.
    
 0.857
MACROH2A2
Core histone macro-H2A.2.
   
 0.852
MACROH2A1
Core histone macro-H2A.1.
   
 0.852
Hdac8
Histone deacetylase 8.
    
 0.842
HDAC6
Histone deacetylase 6.
    
 0.841
HDAC4
Histone deacetylase 4.
    
 0.841
HDAC3
Histone deacetylase 3.
    
 0.833
Your Current Organism:
Chinchilla lanigera
NCBI taxonomy Id: 34839
Other names: C. lanigera, Chinchilla velligera, Mus laniger, long-tailed chinchilla
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.