STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NP_1098ACbtA family protein. (257 aa)    
Predicted Functional Partners:
NP_1096A
CbtB family protein.
       0.857
NP_1100A
Thioredoxin domain protein.
       0.857
chlID
ATP-dependent cobaltochelatase subunit ChlID.
 
     0.691
NP_3416A
Probable prenyl carboxy-lyase.
  
     0.667
NP_4038A
DUF2339 family protein.
  
     0.661
sph1
Smc-like protein Sph1.
  
     0.613
cbiE
Cobalt-precorrin-7 C5-methyltransferase; Unknown EC_number=2.1.1.289.
 
     0.606
cobN
ATP-dependent cobaltochelatase subunit CobN.
 
     0.599
NP_3894A
Integrase family protein.
  
     0.587
cbiC
Cobalt-precorrin-8 methylmutase; Unknown EC_number=5.4.1.60.
 
     0.586
Your Current Organism:
Natronomonas pharaonis
NCBI taxonomy Id: 348780
Other names: N. pharaonis DSM 2160, Natronomonas pharaonis ATCC 35678, Natronomonas pharaonis DSM 2160, Natronomonas pharaonis Gabara, Natronomonas pharaonis JCM 8858, Natronomonas pharaonis str. DSM 2160, Natronomonas pharaonis strain DSM 2160
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.