STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NP_1248ADoxX domain protein. (126 aa)    
Predicted Functional Partners:
grx1
Glutaredoxin.
       0.558
NP_2022A
DUF447 family protein.
  
     0.524
NP_4576A
AI-2E family transport protein.
  
     0.473
NP_4094A
RIO-type protein kinase domain protein.
  
     0.470
NP_1424A
DUF83 domain protein.
  
     0.447
NP_4020A
Type IV pilus biogenesis complex membrane subunit.
  
     0.420
NP_1834A
Probable iron-sulfur protein (2Fe-2S).
  
     0.417
uraA
Xanthine/uracil permease family transport protein.
       0.415
NP_0962A
AI-2E family transport protein.
  
     0.409
Your Current Organism:
Natronomonas pharaonis
NCBI taxonomy Id: 348780
Other names: N. pharaonis DSM 2160, Natronomonas pharaonis ATCC 35678, Natronomonas pharaonis DSM 2160, Natronomonas pharaonis Gabara, Natronomonas pharaonis JCM 8858, Natronomonas pharaonis str. DSM 2160, Natronomonas pharaonis strain DSM 2160
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