Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
NP_1384AOxidoreductase (homolog to thioredoxin-disulfide reductase). (257 aa)    
Predicted Functional Partners:
kef1
Kef-type transport system.
  
  
 0.685
ubaA
SAMP-activating enzyme E1.
  
    0.559
arsA2
ArsA family ATPase.
       0.547
NP_1380A
START domain protein.
       0.494
trxA3
Thioredoxin.
 
 
 0.464
ferA3
Ferredoxin (2Fe-2S) / UspA domain protein.
  
 
 0.464
moaE
Molybdopterin synthase catalytic subunit.
  
  
 0.458
lpdA
Dihydrolipoyl dehydrogenase.
  
 
 0.451
NP_0948A
NifU C-terminal domain protein.
  
  
 0.408
sph2
Smc-like protein Sph2.
  
     0.402
Your Current Organism:
Natronomonas pharaonis
NCBI taxonomy Id: 348780
Other names: N. pharaonis DSM 2160, Natronomonas pharaonis ATCC 35678, Natronomonas pharaonis DSM 2160, Natronomonas pharaonis Gabara, Natronomonas pharaonis JCM 8858, Natronomonas pharaonis str. DSM 2160, Natronomonas pharaonis strain DSM 2160
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