Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
NP_1900AProbable oxidoreductase (short-chain dehydrogenase family). (258 aa)    
Predicted Functional Partners:
NP_1902A
Probable F420-dependent oxidoreductase.
 
  
 0.813
ilvB2
Benzoylformate decarboxylase; Thiamine pyrophosphate-dependent enzyme (homolog to acetolactate synthase / benzoylformate decarboxylase); Belongs to the TPP enzyme family.
  
 0.687
NP_1896A
HAD superfamily hydrolase.
  
 
  0.646
NP_3158A
ARM/HEAT repeat protein / protein kinase domain protein.
  
 0.580
NP_1898A
Beta-lactamase domain protein.
   
 
 0.558
hbd4
3-hydroxyacyl-CoA dehydrogenase.
  
 
 0.489
maoC5
MaoC domain protein.
  
 0.481
maoC3
MaoC domain protein.
  
 0.481
maoC2
MaoC domain protein.
  
 0.481
maoC1
MaoC domain protein.
  
 0.481
Your Current Organism:
Natronomonas pharaonis
NCBI taxonomy Id: 348780
Other names: N. pharaonis DSM 2160, Natronomonas pharaonis ATCC 35678, Natronomonas pharaonis DSM 2160, Natronomonas pharaonis Gabara, Natronomonas pharaonis JCM 8858, Natronomonas pharaonis str. DSM 2160, Natronomonas pharaonis strain DSM 2160
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