Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| NP_0006A | phr1 | NP_0006A | NP_3456A | ABC-type transport system ATP-binding/permease protein. | Deoxyribodipyrimidine photolyase; May have a photoreceptor function. Binds DNA; probably functions as a transcriptional repressor (By similarity). | 0.575 |
| NP_0006A | sod | NP_0006A | NP_4040A | ABC-type transport system ATP-binding/permease protein. | Superoxide dismutase (Mn); Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | 0.621 |
| NP_0006A | tif5B | NP_0006A | NP_4982A | ABC-type transport system ATP-binding/permease protein. | Translation initiation factor aIF-5B (bacterial-type IF2); Function in general translation initiation by promoting the binding of the formylmethionine-tRNA to ribosomes. Seems to function along with eIF-2. | 0.596 |
| NP_3454A | phr1 | NP_3454A | NP_3456A | UPF0047 family protein. | Deoxyribodipyrimidine photolyase; May have a photoreceptor function. Binds DNA; probably functions as a transcriptional repressor (By similarity). | 0.553 |
| NP_3454A | uvrC | NP_3454A | NP_1086A | UPF0047 family protein. | UvrABC system protein C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. | 0.412 |
| NP_3458A | phr1 | NP_3458A | NP_3456A | Receiver box histidine kinase. | Deoxyribodipyrimidine photolyase; May have a photoreceptor function. Binds DNA; probably functions as a transcriptional repressor (By similarity). | 0.580 |
| NP_4606A | phr1 | NP_4606A | NP_3456A | Sensor box histidine kinase. | Deoxyribodipyrimidine photolyase; May have a photoreceptor function. Binds DNA; probably functions as a transcriptional repressor (By similarity). | 0.402 |
| NP_4606A | sod | NP_4606A | NP_4040A | Sensor box histidine kinase. | Superoxide dismutase (Mn); Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | 0.431 |
| NP_4606A | uvrC | NP_4606A | NP_1086A | Sensor box histidine kinase. | UvrABC system protein C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. | 0.456 |
| phr1 | NP_0006A | NP_3456A | NP_0006A | Deoxyribodipyrimidine photolyase; May have a photoreceptor function. Binds DNA; probably functions as a transcriptional repressor (By similarity). | ABC-type transport system ATP-binding/permease protein. | 0.575 |
| phr1 | NP_3454A | NP_3456A | NP_3454A | Deoxyribodipyrimidine photolyase; May have a photoreceptor function. Binds DNA; probably functions as a transcriptional repressor (By similarity). | UPF0047 family protein. | 0.553 |
| phr1 | NP_3458A | NP_3456A | NP_3458A | Deoxyribodipyrimidine photolyase; May have a photoreceptor function. Binds DNA; probably functions as a transcriptional repressor (By similarity). | Receiver box histidine kinase. | 0.580 |
| phr1 | NP_4606A | NP_3456A | NP_4606A | Deoxyribodipyrimidine photolyase; May have a photoreceptor function. Binds DNA; probably functions as a transcriptional repressor (By similarity). | Sensor box histidine kinase. | 0.402 |
| phr1 | phr4 | NP_3456A | NP_3956A | Deoxyribodipyrimidine photolyase; May have a photoreceptor function. Binds DNA; probably functions as a transcriptional repressor (By similarity). | Cryptochrome/photolyase-related protein. | 0.428 |
| phr1 | sod | NP_3456A | NP_4040A | Deoxyribodipyrimidine photolyase; May have a photoreceptor function. Binds DNA; probably functions as a transcriptional repressor (By similarity). | Superoxide dismutase (Mn); Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | 0.566 |
| phr1 | tif5B | NP_3456A | NP_4982A | Deoxyribodipyrimidine photolyase; May have a photoreceptor function. Binds DNA; probably functions as a transcriptional repressor (By similarity). | Translation initiation factor aIF-5B (bacterial-type IF2); Function in general translation initiation by promoting the binding of the formylmethionine-tRNA to ribosomes. Seems to function along with eIF-2. | 0.477 |
| phr1 | tspO | NP_3456A | NP_4704A | Deoxyribodipyrimidine photolyase; May have a photoreceptor function. Binds DNA; probably functions as a transcriptional repressor (By similarity). | TspO family protein. | 0.619 |
| phr1 | uvrC | NP_3456A | NP_1086A | Deoxyribodipyrimidine photolyase; May have a photoreceptor function. Binds DNA; probably functions as a transcriptional repressor (By similarity). | UvrABC system protein C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. | 0.650 |
| phr4 | phr1 | NP_3956A | NP_3456A | Cryptochrome/photolyase-related protein. | Deoxyribodipyrimidine photolyase; May have a photoreceptor function. Binds DNA; probably functions as a transcriptional repressor (By similarity). | 0.428 |
| phr4 | tspO | NP_3956A | NP_4704A | Cryptochrome/photolyase-related protein. | TspO family protein. | 0.412 |
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