Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
NP_4290A | NP_4292A | NP_4290A | NP_4292A | DUF3054 family protein. | Uncharacterized protein. | 0.543 |
NP_4290A | NP_4298A | NP_4290A | NP_4298A | DUF3054 family protein. | Uncharacterized protein. | 0.433 |
NP_4290A | coxA3 | NP_4290A | NP_4296A | DUF3054 family protein. | Cox-type terminal oxidase subunit I. | 0.543 |
NP_4290A | coxB3 | NP_4290A | NP_4294A | DUF3054 family protein. | Cox-type terminal oxidase subunit II. | 0.543 |
NP_4290A | ctaB2 | NP_4290A | NP_4288A | DUF3054 family protein. | Protoheme IX geranylgeranyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | 0.773 |
NP_4292A | NP_4290A | NP_4292A | NP_4290A | Uncharacterized protein. | DUF3054 family protein. | 0.543 |
NP_4292A | NP_4298A | NP_4292A | NP_4298A | Uncharacterized protein. | Uncharacterized protein. | 0.683 |
NP_4292A | coxA3 | NP_4292A | NP_4296A | Uncharacterized protein. | Cox-type terminal oxidase subunit I. | 0.804 |
NP_4292A | coxB3 | NP_4292A | NP_4294A | Uncharacterized protein. | Cox-type terminal oxidase subunit II. | 0.857 |
NP_4292A | ctaB2 | NP_4292A | NP_4288A | Uncharacterized protein. | Protoheme IX geranylgeranyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | 0.563 |
NP_4298A | NP_4290A | NP_4298A | NP_4290A | Uncharacterized protein. | DUF3054 family protein. | 0.433 |
NP_4298A | NP_4292A | NP_4298A | NP_4292A | Uncharacterized protein. | Uncharacterized protein. | 0.683 |
NP_4298A | coxA3 | NP_4298A | NP_4296A | Uncharacterized protein. | Cox-type terminal oxidase subunit I. | 0.663 |
NP_4298A | coxB3 | NP_4298A | NP_4294A | Uncharacterized protein. | Cox-type terminal oxidase subunit II. | 0.733 |
NP_4298A | ctaB2 | NP_4298A | NP_4288A | Uncharacterized protein. | Protoheme IX geranylgeranyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | 0.457 |
coxA3 | NP_4290A | NP_4296A | NP_4290A | Cox-type terminal oxidase subunit I. | DUF3054 family protein. | 0.543 |
coxA3 | NP_4292A | NP_4296A | NP_4292A | Cox-type terminal oxidase subunit I. | Uncharacterized protein. | 0.804 |
coxA3 | NP_4298A | NP_4296A | NP_4298A | Cox-type terminal oxidase subunit I. | Uncharacterized protein. | 0.663 |
coxA3 | coxB3 | NP_4296A | NP_4294A | Cox-type terminal oxidase subunit I. | Cox-type terminal oxidase subunit II. | 0.999 |
coxA3 | ctaB2 | NP_4296A | NP_4288A | Cox-type terminal oxidase subunit I. | Protoheme IX geranylgeranyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | 0.989 |
page 1 of 2