Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
NP_4302A | NP_4304A | NP_4302A | NP_4304A | DUF2342 family protein. | Uncharacterized protein. | 0.610 |
NP_4302A | tpa05 | NP_4302A | NP_4300A | DUF2342 family protein. | P-type transport ATPase (probable substrate copper/metal cation). | 0.584 |
NP_4304A | NP_4302A | NP_4304A | NP_4302A | Uncharacterized protein. | DUF2342 family protein. | 0.610 |
NP_4304A | tpa05 | NP_4304A | NP_4300A | Uncharacterized protein. | P-type transport ATPase (probable substrate copper/metal cation). | 0.469 |
dnaK | tpa05 | NP_0218A | NP_4300A | Hsp70-type molecular chaperone DnaK; Acts as a chaperone. | P-type transport ATPase (probable substrate copper/metal cation). | 0.401 |
tp43 | tpa05 | NP_3542A | NP_4300A | FeoB family transport protein. | P-type transport ATPase (probable substrate copper/metal cation). | 0.411 |
tpa05 | NP_4302A | NP_4300A | NP_4302A | P-type transport ATPase (probable substrate copper/metal cation). | DUF2342 family protein. | 0.584 |
tpa05 | NP_4304A | NP_4300A | NP_4304A | P-type transport ATPase (probable substrate copper/metal cation). | Uncharacterized protein. | 0.469 |
tpa05 | dnaK | NP_4300A | NP_0218A | P-type transport ATPase (probable substrate copper/metal cation). | Hsp70-type molecular chaperone DnaK; Acts as a chaperone. | 0.401 |
tpa05 | tp43 | NP_4300A | NP_3542A | P-type transport ATPase (probable substrate copper/metal cation). | FeoB family transport protein. | 0.411 |