STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
znuA2ABC-type transport system periplasmic substrate-binding protein (probable substrate zinc/manganese/metal ions). (340 aa)    
Predicted Functional Partners:
znuB2
ABC-type transport system permease protein (probable substrate zinc/manganese/metal ions).
 
 
 0.997
znuC2
ABC-type transport system ATP-binding protein (probable substrate zinc/manganese/metal ions).
 
 
 0.994
znuB1
ABC-type transport system permease protein (probable substrate zinc).
 
 
 0.989
znuC1
ABC-type transport system ATP-binding protein (probable substrate zinc).
 
 
 0.986
znuA1
ABC-type transport system periplasmic substrate-binding protein (probable substrate zinc).
  
  
 
0.918
sirR2
SirR/DtxR family transcription regulator SirR.
  
  
 0.711
NP_1036A
CobW domain protein.
  
  
 0.593
NP_1038A
CobW domain protein.
  
  
 0.593
rps14b
30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles. Belongs to the universal ribosomal protein uS14 family. Zinc-binding uS14 subfamily.
  
  
 0.593
NP_1822A
CobW domain protein.
  
  
 0.593
Your Current Organism:
Natronomonas pharaonis
NCBI taxonomy Id: 348780
Other names: N. pharaonis DSM 2160, Natronomonas pharaonis ATCC 35678, Natronomonas pharaonis DSM 2160, Natronomonas pharaonis Gabara, Natronomonas pharaonis JCM 8858, Natronomonas pharaonis str. DSM 2160, Natronomonas pharaonis strain DSM 2160
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